Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC008556.1-201ENST00000610908 2040 ntBASIC13.44□□□□□ -0.26
AP1S3Q96PC3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 NCF1B-203ENST00000435988 1254 ntBASIC13.44□□□□□ -0.26
AP1S3Q96PC3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.44□□□□□ -0.26
AP1S3Q96PC3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 MYLKP1-201ENST00000509077 1580 ntBASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 RCC2P3-201ENST00000418112 1537 ntBASIC13.43□□□□□ -0.26
AP1S3Q96PC3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S3Q96PC3 HYMAI-201ENST00000635591 3347 ntBASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 HTR7P1-201ENST00000538670 1336 ntBASIC13.42□□□□□ -0.26
AP1S3Q96PC3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP1S3Q96PC3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms