Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC46A1Q96NT5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AC093677.2-201ENST00000600169 1863 ntBASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 PMPCAP1-201ENST00000508114 1576 ntBASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AP006288.1-201ENST00000446065 395 ntBASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 PRYP5-201ENST00000451909 266 ntBASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AC064836.3-201ENST00000607928 673 ntBASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC46A1Q96NT5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 AC073592.4-201ENST00000623827 446 ntBASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC46A1Q96NT5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 PHGDH-209ENST00000641074 1780 ntBASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC46A1Q96NT5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 AC073621.1-201ENST00000392730 636 ntBASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC46A1Q96NT5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms