Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 AL162727.3-201ENST00000635661 2787 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 AC096733.2-201ENST00000609937 1394 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 AC073195.1-201ENST00000607241 877 ntBASIC13.56□□□□□ -0.24
LINC00479Q96M42 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 FER1L4-210ENST00000615531 5998 ntBASIC13.56□□□□□ -0.24
LINC00479Q96M42 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00479Q96M42 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 AC009949.1-201ENST00000623048 1830 ntBASIC13.55□□□□□ -0.24
LINC00479Q96M42 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00479Q96M42 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms