Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 AL671883.3-201ENST00000603274 991 ntBASIC17.1■□□□□ 0.33
RNF31Q96EP0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF31Q96EP0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF31Q96EP0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 AC012313.1-201ENST00000593393 3059 ntBASIC17.09■□□□□ 0.33
RNF31Q96EP0 AC106820.2-201ENST00000563775 3264 ntBASIC17.09■□□□□ 0.33
RNF31Q96EP0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 MTDHP3-201ENST00000594186 672 ntBASIC17.09■□□□□ 0.33
RNF31Q96EP0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 AC243591.1-201ENST00000452967 1364 ntBASIC17.09■□□□□ 0.33
RNF31Q96EP0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 AC132938.6-201ENST00000623828 1655 ntBASIC17.09■□□□□ 0.33
RNF31Q96EP0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RNF31Q96EP0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF31Q96EP0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
RNF31Q96EP0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF31Q96EP0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF31Q96EP0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF31Q96EP0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF31Q96EP0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF31Q96EP0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 RNA5SP419-201ENST00000515908 135 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms