Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC7.09□□□□□ -1.28
SYNE2Q8WXH0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RPSAP52-203ENST00000622976 1023 ntBASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 MNT-208ENST00000575394 606 ntTSL 4 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 LINC00602-201ENST00000629776 2065 ntBASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 FAM86HP-204ENST00000513466 959 ntBASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNE2Q8WXH0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AP005212.1-201ENST00000581547 1997 ntBASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 SPDYE19P-201ENST00000338590 713 ntBASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 AL049840.4-201ENST00000602422 811 ntBASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNE2Q8WXH0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms