Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 LYSMD4-203ENST00000378904 2122 ntBASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 AC006449.5-201ENST00000610658 2098 ntBASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 AC046185.3-201ENST00000623228 1824 ntBASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CKAP2Q8WWK9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 CD99P1-205ENST00000527459 561 ntBASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 KRT18P6-201ENST00000555540 1265 ntBASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.61■□□□□ 0.41
CKAP2Q8WWK9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms