Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 REXO1L9P-201ENST00000604264 2108 ntBASIC30.25■■■□□ 2.43
TRIM41Q8WV44 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC30.25■■■□□ 2.43
TRIM41Q8WV44 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 AL139400.1-201ENST00000366220 510 ntBASIC30.24■■■□□ 2.43
TRIM41Q8WV44 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 POLD4-211ENST00000539074 714 ntTSL 3 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC30.24■■■□□ 2.43
TRIM41Q8WV44 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 THAP5-204ENST00000438865 868 ntTSL 2 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 SNX12-206ENST00000622259 661 ntTSL 5 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM41Q8WV44 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 AC011467.2-201ENST00000598425 242 ntBASIC30.22■■■□□ 2.43
TRIM41Q8WV44 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 CECR7-204ENST00000609932 568 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 EFTUD1P1-204ENST00000560401 1798 ntBASIC30.22■■■□□ 2.43
TRIM41Q8WV44 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM41Q8WV44 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 COX5A-206ENST00000568783 571 ntTSL 3 BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 INTS4P1-201ENST00000438455 1935 ntBASIC30.21■■■□□ 2.43
TRIM41Q8WV44 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM41Q8WV44 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC30.2■■■□□ 2.43
TRIM41Q8WV44 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TRIM41Q8WV44 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TRIM41Q8WV44 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TRIM41Q8WV44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TRIM41Q8WV44 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TRIM41Q8WV44 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 CD82-202ENST00000342935 967 ntTSL 5 BASIC30.19■■■□□ 2.42
TRIM41Q8WV44 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms