Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 TP73-AS1-210ENST00000637775 1455 ntBASIC18.64■□□□□ 0.57
RNF139Q8WU17 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 KRT18P55-202ENST00000578578 1546 ntBASIC18.64■□□□□ 0.57
RNF139Q8WU17 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 TSPY19P-201ENST00000418461 509 ntBASIC18.63■□□□□ 0.57
RNF139Q8WU17 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 TSPY18P-201ENST00000441642 509 ntBASIC18.63■□□□□ 0.57
RNF139Q8WU17 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 KRT18P31-201ENST00000506277 1292 ntBASIC18.63■□□□□ 0.57
RNF139Q8WU17 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF139Q8WU17 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF139Q8WU17 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 AL732292.2-201ENST00000609649 430 ntBASIC18.62■□□□□ 0.57
RNF139Q8WU17 AL691432.3-201ENST00000621860 400 ntBASIC18.62■□□□□ 0.57
RNF139Q8WU17 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF139Q8WU17 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF139Q8WU17 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 AC100803.2-201ENST00000562459 1963 ntBASIC18.61■□□□□ 0.57
RNF139Q8WU17 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 AC097374.2-201ENST00000618617 1306 ntBASIC18.61■□□□□ 0.57
RNF139Q8WU17 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 AC111152.3-201ENST00000569699 673 ntBASIC18.61■□□□□ 0.57
RNF139Q8WU17 AL591684.3-201ENST00000605187 298 ntBASIC18.61■□□□□ 0.57
RNF139Q8WU17 AC114341.1-201ENST00000618070 349 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms