Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 CYP51A1P2-201ENST00000419457 1499 ntBASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 ATP6V0CP3-201ENST00000417255 467 ntBASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 ELL2P1-201ENST00000413990 1906 ntBASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC24.34■■□□□ 1.49
ARHGEF28Q8N1W1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 AC254562.1-201ENST00000417586 456 ntBASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 AC068137.2-201ENST00000605408 478 ntBASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 GGTLC5P-201ENST00000617623 998 ntBASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 AC046185.3-201ENST00000623228 1824 ntBASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 AL135999.2-201ENST00000622438 1686 ntBASIC24.33■■□□□ 1.49
ARHGEF28Q8N1W1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
ARHGEF28Q8N1W1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
ARHGEF28Q8N1W1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ARHGEF28Q8N1W1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 C20orf181-201ENST00000623918 480 ntBASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 BICD1-207ENST00000551848 1962 ntBASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.32■■□□□ 1.48
ARHGEF28Q8N1W1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 AC006116.8-202ENST00000587620 1550 ntBASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 PAWRP1-201ENST00000451083 565 ntBASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ARHGEF28Q8N1W1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms