Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 MIR663A-201ENST00000385250 93 ntBASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 Z85996.1-201ENST00000494644 937 ntBASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 SOX15-203ENST00000570788 1093 ntBASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD2Q8IV50 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 AC099063.4-201ENST00000641099 1602 ntBASIC15.58■□□□□ 0.09
LYSMD2Q8IV50 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 FER1L4-210ENST00000615531 5998 ntBASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 CROCCP5-201ENST00000436658 830 ntBASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 AC026185.1-201ENST00000445748 174 ntBASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 AL162430.1-201ENST00000480705 870 ntBASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD2Q8IV50 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms