Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 METTL23-205ENST00000588302 925 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 AC007064.4-201ENST00000637740 555 ntBASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 AP000997.3-201ENST00000623333 2250 ntBASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 REXO1L9P-201ENST00000604264 2108 ntBASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 KRT18P55-202ENST00000578578 1546 ntBASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC26.2■■□□□ 1.79
CCDC141Q6ZP82 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC141Q6ZP82 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
CCDC141Q6ZP82 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 PAWRP1-201ENST00000451083 565 ntBASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
CCDC141Q6ZP82 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 AC092919.2-201ENST00000623631 1645 ntBASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 CBR1-202ENST00000399191 838 ntTSL 3 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC141Q6ZP82 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 CCND1-203ENST00000536559 553 ntTSL 3 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 MIR3197-201ENST00000582241 73 ntBASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 AC106028.4-201ENST00000614509 607 ntBASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 PI4KAP1-204ENST00000612579 1703 ntBASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC141Q6ZP82 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 AC087163.2-201ENST00000457299 853 ntBASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 AC022145.2-201ENST00000598203 171 ntBASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 AC006116.8-202ENST00000587620 1550 ntBASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC141Q6ZP82 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms