Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 AL138966.2-201ENST00000621997 464 ntBASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 AC141257.4-201ENST00000634557 245 ntBASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 AC136944.6-201ENST00000634818 245 ntBASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 FAM8A6P-201ENST00000407496 1135 ntBASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXR1Q6PIV2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXR1Q6PIV2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXR1Q6PIV2 AC096733.2-201ENST00000609937 1394 ntBASIC18.52■□□□□ 0.55
FOXR1Q6PIV2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
FOXR1Q6PIV2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 AL359075.1-203ENST00000462729 1002 ntBASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 AL121894.2-201ENST00000602977 491 ntBASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 AC140113.3-201ENST00000605663 199 ntBASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 AC011558.1-201ENST00000623459 338 ntBASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms