Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 AL356652.1-201ENST00000615962 565 ntBASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 MYC-209ENST00000641252 345 ntBASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 AC104417.2-201ENST00000562989 1793 ntBASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM88Q6PEY1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 PGM5P4-201ENST00000421970 445 ntBASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 TSPY20P-201ENST00000450910 630 ntBASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC104640.1-201ENST00000562617 2109 ntBASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms