Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 ANO7L1-203ENST00000602586 1720 ntBASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 SPDYE14P-201ENST00000442619 822 ntBASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 AL158211.3-201ENST00000607385 239 ntBASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNAPC4Q5SXM2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SNAPC4Q5SXM2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SNAPC4Q5SXM2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC28.7■■■□□ 2.19
SNAPC4Q5SXM2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SNAPC4Q5SXM2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SNAPC4Q5SXM2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
SNAPC4Q5SXM2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC28.7■■■□□ 2.18
SNAPC4Q5SXM2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 AC243562.1-201ENST00000560672 389 ntBASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 BSG-214ENST00000614867 960 ntTSL 3 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SNAPC4Q5SXM2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 ACTG1P4-201ENST00000425123 1122 ntBASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 SLC25A6P2-201ENST00000497974 877 ntBASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 AC025048.6-201ENST00000634326 1161 ntBASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC28.68■■■□□ 2.18
SNAPC4Q5SXM2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 FAM86C2P-203ENST00000528684 1004 ntBASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SNAPC4Q5SXM2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 AC022494.1-201ENST00000466044 728 ntBASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 PHGDH-209ENST00000641074 1780 ntBASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms