Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 BNIP3P42-201ENST00000454982 569 ntBASIC20.35■□□□□ 0.85
HTRA3P83110 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.35■□□□□ 0.85
HTRA3P83110 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.35■□□□□ 0.85
HTRA3P83110 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.35■□□□□ 0.85
HTRA3P83110 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.35■□□□□ 0.85
HTRA3P83110 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HTRA3P83110 BNIP3P29-201ENST00000598302 571 ntBASIC20.35■□□□□ 0.85
HTRA3P83110 AC011447.5-201ENST00000616168 564 ntBASIC20.35■□□□□ 0.85
HTRA3P83110 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HTRA3P83110 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.35■□□□□ 0.85
HTRA3P83110 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTRA3P83110 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 AC129492.6-201ENST00000611383 1305 ntBASIC20.34■□□□□ 0.85
HTRA3P83110 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
HTRA3P83110 ACTBP11-201ENST00000436287 1126 ntBASIC20.34■□□□□ 0.85
HTRA3P83110 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.34■□□□□ 0.85
HTRA3P83110 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.34■□□□□ 0.85
HTRA3P83110 WASH4P-201ENST00000564273 1246 ntBASIC20.34■□□□□ 0.85
HTRA3P83110 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.34■□□□□ 0.85
HTRA3P83110 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.34■□□□□ 0.85
HTRA3P83110 MIR6775-201ENST00000617557 69 ntBASIC20.34■□□□□ 0.85
HTRA3P83110 COX11-210ENST00000639671 696 ntBASIC20.34■□□□□ 0.85
HTRA3P83110 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HTRA3P83110 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA3P83110 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HTRA3P83110 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HTRA3P83110 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA3P83110 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.33■□□□□ 0.85
HTRA3P83110 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA3P83110 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA3P83110 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA3P83110 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HTRA3P83110 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HTRA3P83110 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA3P83110 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.33■□□□□ 0.85
HTRA3P83110 KRT223P-202ENST00000449164 1292 ntBASIC20.33■□□□□ 0.85
HTRA3P83110 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.33■□□□□ 0.85
HTRA3P83110 RN7SL219P-201ENST00000582872 296 ntBASIC20.33■□□□□ 0.85
HTRA3P83110 AC099568.2-201ENST00000609194 695 ntBASIC20.33■□□□□ 0.85
HTRA3P83110 AC008738.7-201ENST00000609744 511 ntBASIC20.33■□□□□ 0.85
HTRA3P83110 SPDYE12P-201ENST00000618416 771 ntBASIC20.33■□□□□ 0.85
HTRA3P83110 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.33■□□□□ 0.85
HTRA3P83110 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA3P83110 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.33■□□□□ 0.85
HTRA3P83110 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HTRA3P83110 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.33■□□□□ 0.84
HTRA3P83110 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HTRA3P83110 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
HTRA3P83110 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA3P83110 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HTRA3P83110 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.32■□□□□ 0.84
HTRA3P83110 GNAQP1-201ENST00000444815 1067 ntBASIC20.32■□□□□ 0.84
HTRA3P83110 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA3P83110 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA3P83110 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.32■□□□□ 0.84
HTRA3P83110 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA3P83110 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.32■□□□□ 0.84
HTRA3P83110 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA3P83110 MIR6727-201ENST00000620702 65 ntBASIC20.32■□□□□ 0.84
HTRA3P83110 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HTRA3P83110 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA3P83110 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HTRA3P83110 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA3P83110 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA3P83110 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms