Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
IRX4P78413 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.47■□□□□ 0.55
IRX4P78413 AC120114.3-201ENST00000611923 658 ntBASIC18.47■□□□□ 0.55
IRX4P78413 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IRX4P78413 ESPNP-201ENST00000270691 2015 ntBASIC18.47■□□□□ 0.55
IRX4P78413 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.47■□□□□ 0.55
IRX4P78413 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IRX4P78413 HLA-A-201ENST00000376802 1334 ntBASIC18.47■□□□□ 0.55
IRX4P78413 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IRX4P78413 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
IRX4P78413 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.46■□□□□ 0.55
IRX4P78413 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 AC134043.2-201ENST00000624206 2238 ntBASIC18.46■□□□□ 0.55
IRX4P78413 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.46■□□□□ 0.55
IRX4P78413 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
IRX4P78413 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.46■□□□□ 0.55
IRX4P78413 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.46■□□□□ 0.55
IRX4P78413 AC074051.2-201ENST00000565115 352 ntBASIC18.46■□□□□ 0.55
IRX4P78413 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
IRX4P78413 AL671883.3-201ENST00000603274 991 ntBASIC18.46■□□□□ 0.55
IRX4P78413 AL353801.3-201ENST00000609898 542 ntBASIC18.46■□□□□ 0.55
IRX4P78413 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX4P78413 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX4P78413 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX4P78413 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX4P78413 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
IRX4P78413 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX4P78413 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX4P78413 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX4P78413 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX4P78413 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
IRX4P78413 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX4P78413 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX4P78413 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IRX4P78413 REXO1L9P-201ENST00000604264 2108 ntBASIC18.45■□□□□ 0.54
IRX4P78413 BX640515.1-201ENST00000617215 977 ntBASIC18.45■□□□□ 0.54
IRX4P78413 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX4P78413 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX4P78413 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX4P78413 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IRX4P78413 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IRX4P78413 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX4P78413 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
IRX4P78413 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IRX4P78413 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX4P78413 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX4P78413 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.44■□□□□ 0.54
IRX4P78413 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms