Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RPL39P62891 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
RPL39P62891 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 HOXB1-202ENST00000577092 1414 ntBASIC12.56□□□□□ -0.4
RPL39P62891 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 AC104771.1-201ENST00000603335 964 ntBASIC12.56□□□□□ -0.4
RPL39P62891 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
RPL39P62891 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.56□□□□□ -0.4
RPL39P62891 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RPL39P62891 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RPL39P62891 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RPL39P62891 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 MFAP1P1-201ENST00000442257 1255 ntBASIC12.55□□□□□ -0.4
RPL39P62891 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.55□□□□□ -0.4
RPL39P62891 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
RPL39P62891 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 MIR4674-201ENST00000582457 87 ntBASIC12.55□□□□□ -0.4
RPL39P62891 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.55□□□□□ -0.4
RPL39P62891 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 AC060834.1-201ENST00000443027 2032 ntBASIC12.55□□□□□ -0.4
RPL39P62891 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.55□□□□□ -0.4
RPL39P62891 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.55□□□□□ -0.4
RPL39P62891 NFIC-211ENST00000641145 8399 ntBASIC12.55□□□□□ -0.4
RPL39P62891 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RPL39P62891 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms