Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RAB5BP61020 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB5BP61020 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
RAB5BP61020 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB5BP61020 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAB5BP61020 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAB5BP61020 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAB5BP61020 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB5BP61020 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RAB5BP61020 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB5BP61020 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB5BP61020 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB5BP61020 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RAB5BP61020 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
RAB5BP61020 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB5BP61020 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 HLA-G-202ENST00000376815 851 ntBASIC13.89□□□□□ -0.19
RAB5BP61020 HLA-G-203ENST00000376818 1127 ntBASIC13.89□□□□□ -0.19
RAB5BP61020 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB5BP61020 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 AC105265.2-201ENST00000467189 838 ntBASIC13.89□□□□□ -0.19
RAB5BP61020 UNC93B8-201ENST00000511903 705 ntBASIC13.89□□□□□ -0.19
RAB5BP61020 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB5BP61020 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RAB5BP61020 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB5BP61020 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 AC112777.1-201ENST00000540175 1423 ntBASIC13.89□□□□□ -0.19
RAB5BP61020 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB5BP61020 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 AC133963.1-201ENST00000504166 1679 ntBASIC13.88□□□□□ -0.19
RAB5BP61020 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB5BP61020 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB5BP61020 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB5BP61020 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB5BP61020 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
RAB5BP61020 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB5BP61020 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB5BP61020 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB5BP61020 CDV3P1-201ENST00000471403 739 ntBASIC13.88□□□□□ -0.19
RAB5BP61020 AC009299.2-201ENST00000482477 511 ntBASIC13.88□□□□□ -0.19
RAB5BP61020 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms