Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH8P55286 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH8P55286 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH8P55286 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH8P55286 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CDH8P55286 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 AL450487.1-201ENST00000426799 995 ntBASIC18.91■□□□□ 0.62
CDH8P55286 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH8P55286 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH8P55286 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH8P55286 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH8P55286 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.91■□□□□ 0.62
CDH8P55286 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 IFNL4P1-201ENST00000607083 540 ntBASIC18.91■□□□□ 0.62
CDH8P55286 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH8P55286 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH8P55286 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDH8P55286 FZD10-202ENST00000539839 3282 ntBASIC18.91■□□□□ 0.62
CDH8P55286 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH8P55286 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CDH8P55286 AL355312.1-201ENST00000407115 2176 ntBASIC18.91■□□□□ 0.62
CDH8P55286 BX276092.7-203ENST00000637198 1536 ntBASIC18.9■□□□□ 0.62
CDH8P55286 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH8P55286 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH8P55286 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH8P55286 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDH8P55286 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH8P55286 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH8P55286 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
CDH8P55286 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH8P55286 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDH8P55286 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH8P55286 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH8P55286 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH8P55286 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH8P55286 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH8P55286 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH8P55286 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH8P55286 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.89■□□□□ 0.61
CDH8P55286 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH8P55286 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDH8P55286 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH8P55286 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH8P55286 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDH8P55286 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH8P55286 HTR7P1-202ENST00000624664 4411 ntBASIC18.89■□□□□ 0.61
CDH8P55286 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH8P55286 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH8P55286 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms