Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC4P55056 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOC4P55056 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC4P55056 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
APOC4P55056 BX276092.7-203ENST00000637198 1536 ntBASIC12.98□□□□□ -0.33
APOC4P55056 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC4P55056 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 AL356309.3-201ENST00000624132 1934 ntBASIC12.98□□□□□ -0.33
APOC4P55056 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
APOC4P55056 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.98□□□□□ -0.33
APOC4P55056 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.98□□□□□ -0.33
APOC4P55056 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 COX5BP2-201ENST00000392354 334 ntBASIC12.98□□□□□ -0.33
APOC4P55056 DDX43P3-201ENST00000441064 443 ntBASIC12.98□□□□□ -0.33
APOC4P55056 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.98□□□□□ -0.33
APOC4P55056 AC009078.2-202ENST00000463353 338 ntBASIC12.98□□□□□ -0.33
APOC4P55056 AC079776.4-201ENST00000511039 504 ntBASIC12.98□□□□□ -0.33
APOC4P55056 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.98□□□□□ -0.33
APOC4P55056 AP001269.4-201ENST00000609611 512 ntBASIC12.98□□□□□ -0.33
APOC4P55056 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APOC4P55056 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC4P55056 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
APOC4P55056 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 FLJ13224-201ENST00000313737 1514 ntBASIC12.98□□□□□ -0.33
APOC4P55056 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC4P55056 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC4P55056 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC4P55056 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
APOC4P55056 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC4P55056 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
APOC4P55056 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC4P55056 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC4P55056 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 FGFR3P6-201ENST00000457012 610 ntBASIC12.97□□□□□ -0.33
APOC4P55056 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC4P55056 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.97□□□□□ -0.33
APOC4P55056 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
APOC4P55056 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC4P55056 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.97□□□□□ -0.33
APOC4P55056 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC4P55056 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms