Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLCNKAP51800 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.39■□□□□ 0.38
CLCNKAP51800 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 DDX43P3-201ENST00000441064 443 ntBASIC17.39■□□□□ 0.37
CLCNKAP51800 ABCD1P5-201ENST00000445663 754 ntBASIC17.39■□□□□ 0.37
CLCNKAP51800 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.39■□□□□ 0.37
CLCNKAP51800 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCNKAP51800 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCNKAP51800 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCNKAP51800 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 AC009949.1-201ENST00000623048 1830 ntBASIC17.38■□□□□ 0.37
CLCNKAP51800 KRT18P55-202ENST00000578578 1546 ntBASIC17.38■□□□□ 0.37
CLCNKAP51800 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 AC010460.3-201ENST00000511359 1579 ntBASIC17.38■□□□□ 0.37
CLCNKAP51800 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 AC103564.2-201ENST00000432853 1299 ntBASIC17.38■□□□□ 0.37
CLCNKAP51800 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 AC079781.3-201ENST00000449110 356 ntBASIC17.38■□□□□ 0.37
CLCNKAP51800 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCNKAP51800 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 AL355877.3-201ENST00000622820 899 ntBASIC17.38■□□□□ 0.37
CLCNKAP51800 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLCNKAP51800 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCNKAP51800 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
CLCNKAP51800 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCNKAP51800 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCNKAP51800 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCNKAP51800 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCNKAP51800 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 FDX1P1-201ENST00000449115 551 ntBASIC17.37■□□□□ 0.37
CLCNKAP51800 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCNKAP51800 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.37■□□□□ 0.37
CLCNKAP51800 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCNKAP51800 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms