Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.13□□□□□ -0.47
PCP4P48539 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.13□□□□□ -0.47
PCP4P48539 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.12□□□□□ -0.47
PCP4P48539 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PCP4P48539 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
PCP4P48539 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PCP4P48539 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.12□□□□□ -0.47
PCP4P48539 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PCP4P48539 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms