Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RFX1P22670 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX1P22670 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.32■□□□□ 0.68
RFX1P22670 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.32■□□□□ 0.68
RFX1P22670 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.32■□□□□ 0.68
RFX1P22670 AC120114.3-201ENST00000611923 658 ntBASIC19.32■□□□□ 0.68
RFX1P22670 AC009154.2-201ENST00000621177 724 ntBASIC19.32■□□□□ 0.68
RFX1P22670 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.32■□□□□ 0.68
RFX1P22670 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX1P22670 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.32■□□□□ 0.68
RFX1P22670 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RFX1P22670 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RFX1P22670 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX1P22670 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX1P22670 DDX43P3-201ENST00000441064 443 ntBASIC19.31■□□□□ 0.68
RFX1P22670 TOB2P1-201ENST00000469761 992 ntBASIC19.31■□□□□ 0.68
RFX1P22670 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX1P22670 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX1P22670 AC012615.1-201ENST00000565797 1299 ntBASIC19.31■□□□□ 0.68
RFX1P22670 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 AC138894.3-201ENST00000603787 634 ntBASIC19.31■□□□□ 0.68
RFX1P22670 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX1P22670 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX1P22670 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFX1P22670 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX1P22670 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
RFX1P22670 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 KRT18P31-201ENST00000506277 1292 ntBASIC19.3■□□□□ 0.68
RFX1P22670 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX1P22670 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.3■□□□□ 0.68
RFX1P22670 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX1P22670 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX1P22670 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX1P22670 AC133963.1-201ENST00000504166 1679 ntBASIC19.3■□□□□ 0.68
RFX1P22670 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX1P22670 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX1P22670 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX1P22670 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms