Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAP43P17677 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GAP43P17677 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.55■□□□□ 0.72
GAP43P17677 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
GAP43P17677 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GAP43P17677 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GAP43P17677 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.55■□□□□ 0.72
GAP43P17677 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.55■□□□□ 0.72
GAP43P17677 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.55■□□□□ 0.72
GAP43P17677 AC011467.2-201ENST00000598425 242 ntBASIC19.55■□□□□ 0.72
GAP43P17677 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GAP43P17677 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GAP43P17677 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAP43P17677 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAP43P17677 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAP43P17677 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GAP43P17677 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GAP43P17677 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GAP43P17677 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.54■□□□□ 0.72
GAP43P17677 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.54■□□□□ 0.72
GAP43P17677 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.54■□□□□ 0.72
GAP43P17677 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 TP73-AS1-210ENST00000637775 1455 ntBASIC19.54■□□□□ 0.72
GAP43P17677 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAP43P17677 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.53■□□□□ 0.72
GAP43P17677 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
GAP43P17677 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.53■□□□□ 0.72
GAP43P17677 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GAP43P17677 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.53■□□□□ 0.72
GAP43P17677 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.53■□□□□ 0.72
GAP43P17677 AC103564.2-201ENST00000432853 1299 ntBASIC19.53■□□□□ 0.72
GAP43P17677 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
GAP43P17677 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.53■□□□□ 0.72
GAP43P17677 BNIP3P18-201ENST00000593976 575 ntBASIC19.53■□□□□ 0.72
GAP43P17677 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.53■□□□□ 0.72
GAP43P17677 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GAP43P17677 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.53■□□□□ 0.72
GAP43P17677 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.53■□□□□ 0.72
GAP43P17677 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.53■□□□□ 0.72
GAP43P17677 AL138688.1-201ENST00000624851 1594 ntBASIC19.53■□□□□ 0.72
GAP43P17677 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAP43P17677 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.52■□□□□ 0.72
GAP43P17677 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
GAP43P17677 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GAP43P17677 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.52■□□□□ 0.72
GAP43P17677 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
GAP43P17677 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GAP43P17677 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAP43P17677 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.52■□□□□ 0.71
GAP43P17677 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GAP43P17677 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms