Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SERBP1P1-201ENST00000396021 1160 ntBASIC14.27□□□□□ -0.13
APOC3P02656 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.27□□□□□ -0.13
APOC3P02656 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.27□□□□□ -0.13
APOC3P02656 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.27□□□□□ -0.13
APOC3P02656 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.27□□□□□ -0.13
APOC3P02656 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC3P02656 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC3P02656 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 RBM17P2-201ENST00000616397 1405 ntBASIC14.26□□□□□ -0.13
APOC3P02656 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 TNRC18P2-201ENST00000417666 2714 ntBASIC14.26□□□□□ -0.13
APOC3P02656 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC3P02656 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 MIR6724-1-201ENST00000616420 92 ntBASIC14.26□□□□□ -0.13
APOC3P02656 MIR6724-2-201ENST00000616483 92 ntBASIC14.26□□□□□ -0.13
APOC3P02656 MIR6724-4-201ENST00000617390 92 ntBASIC14.26□□□□□ -0.13
APOC3P02656 MIR6724-3-201ENST00000622482 92 ntBASIC14.26□□□□□ -0.13
APOC3P02656 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOC3P02656 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
APOC3P02656 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC3P02656 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC3P02656 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC3P02656 TFP1-202ENST00000475455 1573 ntBASIC14.26□□□□□ -0.13
APOC3P02656 RCC2P6-201ENST00000526625 1557 ntBASIC14.26□□□□□ -0.13
APOC3P02656 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC3P02656 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
APOC3P02656 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC3P02656 KRT8P33-201ENST00000508125 1423 ntBASIC14.25□□□□□ -0.13
APOC3P02656 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC3P02656 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC3P02656 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC3P02656 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC3P02656 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC3P02656 TSPY9P-201ENST00000440215 945 ntBASIC14.25□□□□□ -0.13
APOC3P02656 SRD5A1P1-201ENST00000442297 786 ntBASIC14.25□□□□□ -0.13
APOC3P02656 TSPY11P-201ENST00000442607 1045 ntBASIC14.25□□□□□ -0.13
APOC3P02656 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC3P02656 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
APOC3P02656 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC3P02656 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC3P02656 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC3P02656 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 AC138035.3-201ENST00000622706 2791 ntBASIC14.25□□□□□ -0.13
APOC3P02656 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
APOC3P02656 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms