Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLSTN1O94985 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.66■□□□□ 0.74
CLSTN1O94985 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.66■□□□□ 0.74
CLSTN1O94985 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLSTN1O94985 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CLSTN1O94985 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.66■□□□□ 0.74
CLSTN1O94985 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CLSTN1O94985 KRT18P48-201ENST00000434763 852 ntBASIC19.66■□□□□ 0.74
CLSTN1O94985 KRT18P35-201ENST00000510488 1269 ntBASIC19.66■□□□□ 0.74
CLSTN1O94985 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLSTN1O94985 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.66■□□□□ 0.74
CLSTN1O94985 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 REXO1L9P-201ENST00000604264 2108 ntBASIC19.66■□□□□ 0.74
CLSTN1O94985 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.66■□□□□ 0.74
CLSTN1O94985 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLSTN1O94985 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
CLSTN1O94985 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLSTN1O94985 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.65■□□□□ 0.74
CLSTN1O94985 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.65■□□□□ 0.74
CLSTN1O94985 AC024563.2-201ENST00000603282 481 ntBASIC19.65■□□□□ 0.74
CLSTN1O94985 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CLSTN1O94985 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLSTN1O94985 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.65■□□□□ 0.74
CLSTN1O94985 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.65■□□□□ 0.74
CLSTN1O94985 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.65■□□□□ 0.74
CLSTN1O94985 AC126755.1-201ENST00000525846 6405 ntBASIC19.65■□□□□ 0.74
CLSTN1O94985 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.65■□□□□ 0.74
CLSTN1O94985 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLSTN1O94985 AC106820.2-201ENST00000563775 3264 ntBASIC19.64■□□□□ 0.74
CLSTN1O94985 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLSTN1O94985 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLSTN1O94985 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.64■□□□□ 0.73
CLSTN1O94985 AL445228.2-201ENST00000605589 952 ntBASIC19.64■□□□□ 0.73
CLSTN1O94985 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.64■□□□□ 0.73
CLSTN1O94985 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.64■□□□□ 0.73
CLSTN1O94985 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CLSTN1O94985 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
CLSTN1O94985 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLSTN1O94985 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLSTN1O94985 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLSTN1O94985 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 GNAS-203ENST00000306120 1878 ntBASIC19.63■□□□□ 0.73
CLSTN1O94985 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.63■□□□□ 0.73
CLSTN1O94985 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 HBZP1-201ENST00000354915 429 ntBASIC19.63■□□□□ 0.73
CLSTN1O94985 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.63■□□□□ 0.73
CLSTN1O94985 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms