Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LCMT2O60294 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.96■□□□□ 0.31
LCMT2O60294 RCN1P2-201ENST00000398357 915 ntBASIC16.96■□□□□ 0.31
LCMT2O60294 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.96■□□□□ 0.31
LCMT2O60294 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.96■□□□□ 0.31
LCMT2O60294 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.96■□□□□ 0.31
LCMT2O60294 MIR3652-201ENST00000579335 131 ntBASIC16.96■□□□□ 0.31
LCMT2O60294 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.96■□□□□ 0.31
LCMT2O60294 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.96■□□□□ 0.31
LCMT2O60294 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LCMT2O60294 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.96■□□□□ 0.31
LCMT2O60294 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LCMT2O60294 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LCMT2O60294 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.96■□□□□ 0.3
LCMT2O60294 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LCMT2O60294 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LCMT2O60294 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.96■□□□□ 0.3
LCMT2O60294 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 PCDHB18P-201ENST00000524813 2368 ntBASIC16.95■□□□□ 0.3
LCMT2O60294 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
LCMT2O60294 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.95■□□□□ 0.3
LCMT2O60294 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.95■□□□□ 0.3
LCMT2O60294 KRT18P56-201ENST00000507275 550 ntBASIC16.95■□□□□ 0.3
LCMT2O60294 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.95■□□□□ 0.3
LCMT2O60294 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.95■□□□□ 0.3
LCMT2O60294 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
LCMT2O60294 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 AC011467.2-201ENST00000598425 242 ntBASIC16.95■□□□□ 0.3
LCMT2O60294 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.95■□□□□ 0.3
LCMT2O60294 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCMT2O60294 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.95■□□□□ 0.3
LCMT2O60294 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
LCMT2O60294 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.94■□□□□ 0.3
LCMT2O60294 AC096582.2-201ENST00000510860 516 ntBASIC16.94■□□□□ 0.3
LCMT2O60294 FOSL1P1-201ENST00000511041 816 ntBASIC16.94■□□□□ 0.3
LCMT2O60294 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.94■□□□□ 0.3
LCMT2O60294 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.94■□□□□ 0.3
LCMT2O60294 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LCMT2O60294 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 AC012313.10-201ENST00000623509 926 ntBASIC16.94■□□□□ 0.3
LCMT2O60294 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LCMT2O60294 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LCMT2O60294 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
LCMT2O60294 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
LCMT2O60294 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCMT2O60294 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LCMT2O60294 AC090340.1-201ENST00000620778 4980 ntBASIC16.94■□□□□ 0.3
LCMT2O60294 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.93■□□□□ 0.3
LCMT2O60294 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms