Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.24■□□□□ 0.03
SSX5O60225 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
SSX5O60225 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSX5O60225 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSX5O60225 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSX5O60225 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.23■□□□□ 0.03
SSX5O60225 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.23■□□□□ 0.03
SSX5O60225 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SSX5O60225 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.23■□□□□ 0.03
SSX5O60225 FAM197Y1-201ENST00000421178 764 ntBASIC15.23■□□□□ 0.03
SSX5O60225 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 CA15P1-201ENST00000481698 905 ntBASIC15.23■□□□□ 0.03
SSX5O60225 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.23■□□□□ 0.03
SSX5O60225 AC090192.1-201ENST00000517740 490 ntBASIC15.23■□□□□ 0.03
SSX5O60225 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.23■□□□□ 0.03
SSX5O60225 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSX5O60225 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SSX5O60225 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SSX5O60225 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SSX5O60225 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.22■□□□□ 0.03
SSX5O60225 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.22■□□□□ 0.03
SSX5O60225 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.22■□□□□ 0.03
SSX5O60225 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.22■□□□□ 0.03
SSX5O60225 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SSX5O60225 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 DGCR10-201ENST00000609839 495 ntBASIC15.22■□□□□ 0.03
SSX5O60225 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.22■□□□□ 0.03
SSX5O60225 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 LINC00304-203ENST00000565008 1864 ntBASIC15.22■□□□□ 0.03
SSX5O60225 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SSX5O60225 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
SSX5O60225 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSX5O60225 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SSX5O60225 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SSX5O60225 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SSX5O60225 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SSX5O60225 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.21■□□□□ 0.03
SSX5O60225 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.21■□□□□ 0.03
SSX5O60225 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.21■□□□□ 0.03
SSX5O60225 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.21■□□□□ 0.03
SSX5O60225 KRT8P7-201ENST00000533003 1432 ntBASIC15.21■□□□□ 0.03
SSX5O60225 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.21■□□□□ 0.03
SSX5O60225 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.21■□□□□ 0.03
SSX5O60225 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSX5O60225 KRT18P6-201ENST00000555540 1265 ntBASIC15.21■□□□□ 0.03
SSX5O60225 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.21■□□□□ 0.03
SSX5O60225 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms