Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
RIPK2O43353 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RIPK2O43353 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 AC005915.1-201ENST00000624912 2018 ntBASIC18.01■□□□□ 0.47
RIPK2O43353 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RIPK2O43353 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 CCR12P-201ENST00000446203 998 ntBASIC18.01■□□□□ 0.47
RIPK2O43353 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.01■□□□□ 0.47
RIPK2O43353 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.01■□□□□ 0.47
RIPK2O43353 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RIPK2O43353 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RIPK2O43353 DOC2GP-204ENST00000639052 2548 ntBASIC18.01■□□□□ 0.47
RIPK2O43353 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.01■□□□□ 0.47
RIPK2O43353 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RIPK2O43353 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RIPK2O43353 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RIPK2O43353 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18■□□□□ 0.47
RIPK2O43353 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18■□□□□ 0.47
RIPK2O43353 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
RIPK2O43353 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 RPS2P55-201ENST00000397318 883 ntBASIC18■□□□□ 0.47
RIPK2O43353 AC007663.1-201ENST00000438948 1240 ntBASIC18■□□□□ 0.47
RIPK2O43353 AL355355.2-201ENST00000442321 338 ntBASIC18■□□□□ 0.47
RIPK2O43353 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 AC107956.1-201ENST00000494359 873 ntBASIC18■□□□□ 0.47
RIPK2O43353 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RIPK2O43353 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
RIPK2O43353 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RIPK2O43353 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
RIPK2O43353 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RIPK2O43353 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RIPK2O43353 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.99■□□□□ 0.47
RIPK2O43353 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.99■□□□□ 0.47
RIPK2O43353 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.99■□□□□ 0.47
RIPK2O43353 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RIPK2O43353 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.99■□□□□ 0.47
RIPK2O43353 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RIPK2O43353 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.99■□□□□ 0.47
RIPK2O43353 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.99■□□□□ 0.47
RIPK2O43353 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RIPK2O43353 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.99■□□□□ 0.47
RIPK2O43353 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.99■□□□□ 0.47
RIPK2O43353 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms