Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 AC093909.1-201ENST00000504731 1122 ntBASIC17.51■□□□□ 0.39
CACNB4O00305 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNB4O00305 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.51■□□□□ 0.39
CACNB4O00305 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CACNB4O00305 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.51■□□□□ 0.39
CACNB4O00305 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.51■□□□□ 0.39
CACNB4O00305 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNB4O00305 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CACNB4O00305 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNB4O00305 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNB4O00305 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CACNB4O00305 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNB4O00305 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CACNB4O00305 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNB4O00305 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CACNB4O00305 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CACNB4O00305 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNB4O00305 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 RNPS1P1-201ENST00000507437 918 ntBASIC17.5■□□□□ 0.39
CACNB4O00305 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNB4O00305 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNB4O00305 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNB4O00305 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNB4O00305 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNB4O00305 AL139288.1-201ENST00000623748 933 ntBASIC17.5■□□□□ 0.39
CACNB4O00305 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNB4O00305 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CACNB4O00305 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNB4O00305 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CACNB4O00305 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNB4O00305 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNB4O00305 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CACNB4O00305 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 HLA-A-201ENST00000376802 1334 ntBASIC17.49■□□□□ 0.39
CACNB4O00305 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNB4O00305 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 FLJ13224-201ENST00000313737 1514 ntBASIC17.49■□□□□ 0.39
CACNB4O00305 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 AL031284.1-201ENST00000419297 478 ntBASIC17.49■□□□□ 0.39
CACNB4O00305 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNB4O00305 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNB4O00305 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 AP000867.4-201ENST00000641616 219 ntBASIC17.49■□□□□ 0.39
CACNB4O00305 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CACNB4O00305 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNB4O00305 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CACNB4O00305 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CACNB4O00305 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CACNB4O00305 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNB4O00305 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNB4O00305 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNB4O00305 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNB4O00305 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CACNB4O00305 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms