Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PRSS44-201ENST00000515154 1146 ntBASIC16.94■□□□□ 0.3
PDLIM1O00151 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 BX088651.1-201ENST00000540551 451 ntBASIC16.94■□□□□ 0.3
PDLIM1O00151 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.94■□□□□ 0.3
PDLIM1O00151 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM1O00151 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM1O00151 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PDLIM1O00151 AC105020.1-201ENST00000435356 2205 ntBASIC16.93■□□□□ 0.3
PDLIM1O00151 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PDLIM1O00151 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 UNC93B2-201ENST00000285383 730 ntBASIC16.93■□□□□ 0.3
PDLIM1O00151 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.93■□□□□ 0.3
PDLIM1O00151 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 AP000692.2-201ENST00000608391 879 ntBASIC16.93■□□□□ 0.3
PDLIM1O00151 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.93■□□□□ 0.3
PDLIM1O00151 AC011298.2-201ENST00000617989 482 ntBASIC16.93■□□□□ 0.3
PDLIM1O00151 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM1O00151 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM1O00151 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM1O00151 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDLIM1O00151 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDLIM1O00151 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.92■□□□□ 0.3
PDLIM1O00151 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDLIM1O00151 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM1O00151 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM1O00151 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM1O00151 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms