Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 ESRRAP1-201ENST00000400596 1257 ntBASIC15.47■□□□□ 0.07
SHISA3A0PJX4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 AC097488.1-201ENST00000507834 756 ntBASIC15.47■□□□□ 0.07
SHISA3A0PJX4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 CD99P1-205ENST00000527459 561 ntBASIC15.47■□□□□ 0.07
SHISA3A0PJX4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 AC112497.1-201ENST00000624824 639 ntBASIC15.47■□□□□ 0.07
SHISA3A0PJX4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHISA3A0PJX4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.46■□□□□ 0.07
SHISA3A0PJX4 DDX43P3-201ENST00000441064 443 ntBASIC15.46■□□□□ 0.07
SHISA3A0PJX4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 AC116562.2-201ENST00000507042 360 ntBASIC15.46■□□□□ 0.07
SHISA3A0PJX4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 AC010240.3-201ENST00000607688 395 ntBASIC15.46■□□□□ 0.07
SHISA3A0PJX4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SHISA3A0PJX4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SHISA3A0PJX4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SHISA3A0PJX4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 AL662844.4-201ENST00000606367 2838 ntBASIC15.45■□□□□ 0.06
SHISA3A0PJX4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 SLC25A1P3-201ENST00000395415 828 ntBASIC15.45■□□□□ 0.06
SHISA3A0PJX4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 AP003041.3-201ENST00000527151 707 ntBASIC15.45■□□□□ 0.06
SHISA3A0PJX4 KRT18P6-201ENST00000555540 1265 ntBASIC15.45■□□□□ 0.06
SHISA3A0PJX4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SHISA3A0PJX4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms