Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MIR3180-1-201ENST00000580374 94 ntBASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MIR3180-3-201ENST00000584616 94 ntBASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GPR32P1-201ENST00000601788 811 ntBASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AL163051.1-201ENST00000569214 1512 ntBASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SDHAP2-201ENST00000455183 2001 ntBASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GUSBP12-201ENST00000513727 720 ntBASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC012317.2-201ENST00000623305 2251 ntBASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms