Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 AC007064.4-201ENST00000637740 555 ntBASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 BCAR1-209ENST00000546196 1340 ntBASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 PTCHD3P3-201ENST00000403073 906 ntBASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.28■□□□□ 0.68
SCN10AQ9Y5Y9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 AP002472.1-201ENST00000577490 586 ntBASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 AC023141.13-201ENST00000604991 943 ntBASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SCN10AQ9Y5Y9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.27■□□□□ 0.67
SCN10AQ9Y5Y9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCN10AQ9Y5Y9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.27■□□□□ 0.67
SCN10AQ9Y5Y9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCN10AQ9Y5Y9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 AL139400.1-201ENST00000366220 510 ntBASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 AC087163.2-201ENST00000457299 853 ntBASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 SPCS2P1-201ENST00000561636 679 ntBASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 ACTG1P14-201ENST00000446382 1122 ntBASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN10AQ9Y5Y9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 AC093503.3-201ENST00000624917 2352 ntBASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 AC025580.3-201ENST00000617932 1424 ntBASIC19.25■□□□□ 0.67
SCN10AQ9Y5Y9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 AP000997.3-201ENST00000623333 2250 ntBASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms