Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 AC036111.1-201ENST00000533973 1582 ntBASIC17.23■□□□□ 0.35
NDE1Q9NXR1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 LINC02199-201ENST00000506655 2702 ntBASIC17.22■□□□□ 0.35
NDE1Q9NXR1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 NCF1B-203ENST00000435988 1254 ntBASIC17.22■□□□□ 0.35
NDE1Q9NXR1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 UNC93B5-201ENST00000530315 699 ntBASIC17.22■□□□□ 0.35
NDE1Q9NXR1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AC133041.1-202ENST00000642053 222 ntBASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AL031985.4-201ENST00000642138 673 ntBASIC17.22■□□□□ 0.35
NDE1Q9NXR1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDE1Q9NXR1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 HOXB1-202ENST00000577092 1414 ntBASIC17.21■□□□□ 0.35
NDE1Q9NXR1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.21■□□□□ 0.35
NDE1Q9NXR1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 KRASP1-201ENST00000407852 552 ntBASIC17.21■□□□□ 0.35
NDE1Q9NXR1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 AC069544.1-201ENST00000609399 999 ntBASIC17.21■□□□□ 0.35
NDE1Q9NXR1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
NDE1Q9NXR1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDE1Q9NXR1 KRT16P1-201ENST00000399124 1418 ntBASIC17.21■□□□□ 0.34
NDE1Q9NXR1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.21■□□□□ 0.34
NDE1Q9NXR1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NDE1Q9NXR1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NDE1Q9NXR1 MST1L-201ENST00000442552 2185 ntBASIC17.21■□□□□ 0.34
NDE1Q9NXR1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NDE1Q9NXR1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
NDE1Q9NXR1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms