Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 EWSR1-214ENST00000455726 710 ntTSL 310.97□□□□□ -0.656e-6■□□□□ 11
DROSHAQ9NRR4 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.676e-6■□□□□ 11
DROSHAQ9NRR4 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.716e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC10.5□□□□□ -0.736e-6■□□□□ 11
DROSHAQ9NRR4 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.746e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-219ENST00000485037 479 ntTSL 59.84□□□□□ -0.836e-6■□□□□ 11
DROSHAQ9NRR4 ATXN2-217ENST00000548492 556 ntTSL 49.73□□□□□ -0.853e-34■□□□□ 11
DROSHAQ9NRR4 MARCH6-210ENST00000511802 4734 ntTSL 29.63□□□□□ -0.876e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-220ENST00000493426 581 ntTSL 39.37□□□□□ -0.916e-6■□□□□ 11
DROSHAQ9NRR4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC9.23□□□□□ -0.932e-8■□□□□ 11
DROSHAQ9NRR4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.086e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.096e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-211ENST00000477915 743 ntTSL 57.71□□□□□ -1.176e-6■□□□□ 11
DROSHAQ9NRR4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.236e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.86□□□□□ -1.476e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-209ENST00000415761 587 ntTSL 34.81□□□□□ -1.646e-6■□□□□ 11
DROSHAQ9NRR4 DENND4A-207ENST00000567323 804 ntTSL 24.68□□□□□ -1.666e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.07□□□□□ -1.766e-6■□□□□ 11
DROSHAQ9NRR4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.43□□□□□ -1.866e-6■□□□□ 11
DROSHAQ9NRR4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.49□□□□□ -2.016e-6■□□□□ 11
DROSHAQ9NRR4 SNORD72-201ENST00000390994 80 ntBASIC0□□□□□ -2.416e-6■□□□□ 11
DROSHAQ9NRR4 MIR1307-201ENST00000408840 149 ntBASIC21.03■□□□□ 0.964e-7■□□□□ 11
DROSHAQ9NRR4 UBE2K-207ENST00000513231 871 ntTSL 1 (best)36.85■■■■□ 3.492e-8■□□□□ 11
DROSHAQ9NRR4 UBE2K-206ENST00000510934 589 ntTSL 231.88■■■□□ 2.692e-8■□□□□ 11
DROSHAQ9NRR4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.83■■■□□ 2.532e-8■□□□□ 11
DROSHAQ9NRR4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC28.65■■■□□ 2.182e-8■□□□□ 11
DROSHAQ9NRR4 UBE2K-202ENST00000438068 2262 ntTSL 227.18■■□□□ 1.942e-8■□□□□ 11
DROSHAQ9NRR4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.362e-8■□□□□ 11
DROSHAQ9NRR4 AGO2-202ENST00000517293 422 ntTSL 311.41□□□□□ -0.583e-6■□□□□ 11
DROSHAQ9NRR4 FASN-207ENST00000635197 627 ntTSL 324.6■■□□□ 1.534e-9■□□□□ 11
DROSHAQ9NRR4 PHF21A-213ENST00000530312 276 ntTSL 339.49■■■■□ 3.917e-9■□□□□ 11
DROSHAQ9NRR4 RB1CC1-206ENST00000518710 711 ntTSL 339.42■■■■□ 3.91e-6■□□□□ 11
DROSHAQ9NRR4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.61■■■■□ 3.771e-6■□□□□ 11
DROSHAQ9NRR4 DGAT1-207ENST00000531896 981 ntTSL 338.39■■■■□ 3.741e-6■□□□□ 11
DROSHAQ9NRR4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC37.69■■■■□ 3.623e-7■□□□□ 11
DROSHAQ9NRR4 HSBP1-202ENST00000567382 889 ntTSL 237.57■■■■□ 3.611e-13■□□□□ 11
DROSHAQ9NRR4 RALY-206ENST00000448364 1204 ntTSL 237.37■■■■□ 3.571e-6■□□□□ 11
DROSHAQ9NRR4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.467e-9■□□□□ 11
DROSHAQ9NRR4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC36.51■■■■□ 3.441e-6■□□□□ 11
DROSHAQ9NRR4 RB1CC1-208ENST00000521611 528 ntTSL 536.07■■■■□ 3.361e-6■□□□□ 11
DROSHAQ9NRR4 FAM129B-207ENST00000484348 654 ntTSL 1 (best)35.75■■■■□ 3.311e-6■□□□□ 11
DROSHAQ9NRR4 PFDN2-202ENST00000468311 408 ntTSL 235.45■■■■□ 3.277e-9■□□□□ 11
DROSHAQ9NRR4 TMEM9-211ENST00000497582 1075 ntTSL 335.05■■■■□ 3.23e-7■□□□□ 11
DROSHAQ9NRR4 HIST1H3J-202ENST00000479986 522 ntTSL 233.73■■■□□ 2.994e-12■□□□□ 11
DROSHAQ9NRR4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC32.7■■■□□ 2.834e-12■□□□□ 11
DROSHAQ9NRR4 PRMT7-227ENST00000569571 959 ntTSL 532.63■■■□□ 2.811e-6■□□□□ 11
DROSHAQ9NRR4 RALY-204ENST00000413297 766 ntTSL 532.58■■■□□ 2.811e-6■□□□□ 11
DROSHAQ9NRR4 DGAT1-204ENST00000525371 840 ntTSL 532.19■■■□□ 2.741e-6■□□□□ 11
DROSHAQ9NRR4 RALY-202ENST00000333552 786 ntTSL 332■■■□□ 2.711e-6■□□□□ 11
DROSHAQ9NRR4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC31.45■■■□□ 2.633e-7■□□□□ 11
DROSHAQ9NRR4 DAP3-204ENST00000461479 732 ntTSL 531.44■■■□□ 2.621e-6■□□□□ 11
DROSHAQ9NRR4 MIF-203ENST00000498385 435 ntTSL 231.01■■■□□ 2.551e-6■□□□□ 11
DROSHAQ9NRR4 NOC4L-203ENST00000538784 862 ntTSL 230.98■■■□□ 2.551e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-218ENST00000479076 735 ntTSL 530.76■■■□□ 2.511e-6■□□□□ 11
DROSHAQ9NRR4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.74■■■□□ 2.512e-18■□□□□ 11
DROSHAQ9NRR4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.511e-6■□□□□ 11
DROSHAQ9NRR4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.85■■■□□ 2.371e-6■□□□□ 11
DROSHAQ9NRR4 LMAN2-202ENST00000502560 876 ntTSL 329.68■■■□□ 2.347e-9■□□□□ 11
DROSHAQ9NRR4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.331e-6■□□□□ 11
DROSHAQ9NRR4 USP39-218ENST00000493829 1660 ntTSL 229.44■■■□□ 2.31e-6■□□□□ 11
DROSHAQ9NRR4 SPPL3-208ENST00000543854 508 ntTSL 529.3■■■□□ 2.287e-9■□□□□ 11
DROSHAQ9NRR4 RB1CC1-204ENST00000518211 891 ntTSL 529.29■■■□□ 2.281e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-205ENST00000423935 614 ntTSL 229.23■■■□□ 2.271e-6■□□□□ 11
DROSHAQ9NRR4 FAM49B-207ENST00000518285 507 ntTSL 329.18■■■□□ 2.267e-9■□□□□ 11
DROSHAQ9NRR4 OCIAD1-223ENST00000511662 441 ntTSL 529.16■■■□□ 2.261e-6■□□□□ 11
DROSHAQ9NRR4 USP39-209ENST00000458268 751 ntTSL 428.41■■■□□ 2.141e-6■□□□□ 11
DROSHAQ9NRR4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC28.31■■■□□ 2.121e-6■□□□□ 11
DROSHAQ9NRR4 RB1CC1-203ENST00000517963 551 ntTSL 427.66■■■□□ 2.021e-6■□□□□ 11
DROSHAQ9NRR4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.011e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC27.4■■□□□ 1.981e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC27.23■■□□□ 1.951e-6■□□□□ 11
DROSHAQ9NRR4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.9■■□□□ 1.92e-10■□□□□ 11
DROSHAQ9NRR4 USP39-208ENST00000455732 623 ntTSL 326.68■■□□□ 1.861e-6■□□□□ 11
DROSHAQ9NRR4 RNF2-204ENST00000498201 631 ntTSL 226.46■■□□□ 1.832e-10■□□□□ 11
DROSHAQ9NRR4 PRMT7-214ENST00000565356 1723 ntTSL 526.45■■□□□ 1.821e-6■□□□□ 11
DROSHAQ9NRR4 TMEM9-206ENST00000435310 507 ntTSL 226.4■■□□□ 1.823e-7■□□□□ 11
DROSHAQ9NRR4 PRMT7-205ENST00000562050 1005 ntTSL 326.29■■□□□ 1.81e-6■□□□□ 11
DROSHAQ9NRR4 USP39-211ENST00000465282 568 ntTSL 426■■□□□ 1.751e-6■□□□□ 11
DROSHAQ9NRR4 PRMT7-220ENST00000566657 584 ntTSL 225.79■■□□□ 1.721e-6■□□□□ 11
DROSHAQ9NRR4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.71e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.681e-6■□□□□ 11
DROSHAQ9NRR4 SPPL3-207ENST00000543608 636 ntTSL 325.44■■□□□ 1.667e-9■□□□□ 11
DROSHAQ9NRR4 OCIAD1-227ENST00000513641 577 ntTSL 525.07■■□□□ 1.61e-6■□□□□ 11
DROSHAQ9NRR4 SUN1-226ENST00000467483 992 ntTSL 225.01■■□□□ 1.592e-18■□□□□ 11
DROSHAQ9NRR4 USP39-205ENST00000442708 561 ntTSL 424.58■■□□□ 1.531e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.521e-6■□□□□ 11
DROSHAQ9NRR4 PRMT7-206ENST00000562381 713 ntTSL 224.57■■□□□ 1.521e-6■□□□□ 11
DROSHAQ9NRR4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.521e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-212ENST00000471214 1287 ntTSL 524.5■■□□□ 1.511e-6■□□□□ 11
DROSHAQ9NRR4 PRMT7-212ENST00000564050 846 ntTSL 524.16■■□□□ 1.461e-6■□□□□ 11
DROSHAQ9NRR4 MAP4-212ENST00000468075 487 ntTSL 524.03■■□□□ 1.447e-9■□□□□ 11
DROSHAQ9NRR4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC23.71■■□□□ 1.392e-18■□□□□ 11
DROSHAQ9NRR4 OCIAD1-211ENST00000507210 582 ntTSL 323.64■■□□□ 1.371e-6■□□□□ 11
DROSHAQ9NRR4 FAM129B-204ENST00000468379 828 ntTSL 323.52■■□□□ 1.361e-6■□□□□ 11
DROSHAQ9NRR4 SUN1-217ENST00000450538 570 ntTSL 423.3■■□□□ 1.322e-18■□□□□ 11
DROSHAQ9NRR4 PRMT7-215ENST00000565745 440 ntTSL 523.24■■□□□ 1.311e-6■□□□□ 11
DROSHAQ9NRR4 USP39-217ENST00000491659 648 ntTSL 323.14■■□□□ 1.291e-6■□□□□ 11
DROSHAQ9NRR4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.283e-15■□□□□ 11
DROSHAQ9NRR4 ZC3H12A-204ENST00000640233 2721 ntTSL 523.01■■□□□ 1.271e-6■□□□□ 11
DROSHAQ9NRR4 NRF1-207ENST00000477428 513 ntTSL 322.98■■□□□ 1.271e-6■□□□□ 11
Retrieved 100 of 16,331 protein–RNA pairs in 88.4 ms