Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.18■□□□□ 0.18
HMG20AQ9NP66 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.18■□□□□ 0.18
HMG20AQ9NP66 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 KRASP1-201ENST00000407852 552 ntBASIC16.18■□□□□ 0.18
HMG20AQ9NP66 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20AQ9NP66 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 RCC2P6-201ENST00000526625 1557 ntBASIC16.17■□□□□ 0.18
HMG20AQ9NP66 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 KRT16P5-201ENST00000455284 522 ntBASIC16.17■□□□□ 0.18
HMG20AQ9NP66 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20AQ9NP66 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms