Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SIRPAP1-201ENST00000448467 1770 ntBASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 IGHGP-201ENST00000390555 1178 ntBASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 RNF152P1-201ENST00000397754 604 ntBASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 ZNF444P1-201ENST00000559497 298 ntBASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 LINC01451-201ENST00000623792 534 ntBASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEUROD4Q9HD90 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 LTB4R2-202ENST00000528054 3092 ntBASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 KRT8P47-201ENST00000604727 1398 ntBASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 AP003733.1-201ENST00000491725 852 ntBASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 AC006011.2-201ENST00000621313 1158 ntBASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEUROD4Q9HD90 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 MIR662-201ENST00000384847 95 ntBASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 TSPY5P-201ENST00000426936 936 ntBASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEUROD4Q9HD90 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms