Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN3Q9H347 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 KRT18P55-202ENST00000578578 1546 ntBASIC16.46■□□□□ 0.23
UBQLN3Q9H347 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 TOB2P1-201ENST00000469761 992 ntBASIC16.46■□□□□ 0.23
UBQLN3Q9H347 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 AL353801.3-201ENST00000609898 542 ntBASIC16.46■□□□□ 0.23
UBQLN3Q9H347 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.46■□□□□ 0.23
UBQLN3Q9H347 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN3Q9H347 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.46■□□□□ 0.22
UBQLN3Q9H347 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.46■□□□□ 0.22
UBQLN3Q9H347 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBQLN3Q9H347 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBQLN3Q9H347 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
UBQLN3Q9H347 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 MIR3652-201ENST00000579335 131 ntBASIC16.45■□□□□ 0.22
UBQLN3Q9H347 AC124864.1-201ENST00000623408 392 ntBASIC16.45■□□□□ 0.22
UBQLN3Q9H347 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN3Q9H347 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN3Q9H347 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms