Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 HBZP1-201ENST00000354915 429 ntBASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 RNF152P1-201ENST00000397754 604 ntBASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 DUX4L26-201ENST00000489078 1255 ntBASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 IGHGP-201ENST00000390555 1178 ntBASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 FAM8A6P-201ENST00000407496 1135 ntBASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 AK4P3-201ENST00000418260 669 ntBASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 AC112907.2-201ENST00000448639 330 ntBASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF3BQ9BZI7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 MIR662-201ENST00000384847 95 ntBASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 TSPY12P-201ENST00000421279 868 ntBASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AC104076.2-201ENST00000448912 469 ntBASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AP003733.1-201ENST00000491725 852 ntBASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 AC009154.2-201ENST00000621177 724 ntBASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF3BQ9BZI7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 HLA-J-201ENST00000462773 1622 ntBASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 AL353692.3-201ENST00000407031 1396 ntBASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF3BQ9BZI7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms