Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 AC026471.1-201ENST00000564629 3026 ntBASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 AC244107.1-201ENST00000442033 332 ntBASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 AC023141.13-201ENST00000604991 943 ntBASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NECTIN4Q96NY8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 ESPNP-201ENST00000270691 2015 ntBASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 BCRP1-201ENST00000444246 691 ntBASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 AL513210.1-201ENST00000629608 234 ntBASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NECTIN4Q96NY8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 AC093010.1-201ENST00000473625 1624 ntBASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 AC025678.2-201ENST00000562061 970 ntBASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN4Q96NY8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms