Protein–RNA interactions for Protein: Q96B26

EXOSC8, Exosome complex component RRP43, humanhuman

Known RBP Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8Q96B26 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.88■□□□□ 0.29
EXOSC8Q96B26 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.88■□□□□ 0.29
EXOSC8Q96B26 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AL645929.1-201ENST00000420084 975 ntBASIC16.87■□□□□ 0.29
EXOSC8Q96B26 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AC112698.1-201ENST00000510299 916 ntBASIC16.87■□□□□ 0.29
EXOSC8Q96B26 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AL390719.2-201ENST00000606993 987 ntBASIC16.87■□□□□ 0.29
EXOSC8Q96B26 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EXOSC8Q96B26 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.86■□□□□ 0.29
EXOSC8Q96B26 AL049597.2-201ENST00000565575 961 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms