Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.56■■□□□ 1.2
SMARCC1Q92922 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SMARCC1Q92922 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.56■■□□□ 1.2
SMARCC1Q92922 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.56■■□□□ 1.2
SMARCC1Q92922 BCRP1-201ENST00000444246 691 ntBASIC22.56■■□□□ 1.2
SMARCC1Q92922 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.56■■□□□ 1.2
SMARCC1Q92922 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SMARCC1Q92922 AC105339.1-204ENST00000636249 355 ntBASIC22.56■■□□□ 1.2
SMARCC1Q92922 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC1Q92922 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 AC004461.1-201ENST00000412461 403 ntBASIC22.55■■□□□ 1.2
SMARCC1Q92922 DDX43P3-201ENST00000441064 443 ntBASIC22.55■■□□□ 1.2
SMARCC1Q92922 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 HLA-J-203ENST00000494367 1087 ntBASIC22.55■■□□□ 1.2
SMARCC1Q92922 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 AL031598.1-201ENST00000561511 1773 ntBASIC22.55■■□□□ 1.2
SMARCC1Q92922 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 AC116562.4-201ENST00000641316 2276 ntBASIC22.55■■□□□ 1.2
SMARCC1Q92922 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.55■■□□□ 1.2
SMARCC1Q92922 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC1Q92922 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 CXCL1P1-201ENST00000502804 216 ntBASIC22.54■■□□□ 1.2
SMARCC1Q92922 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 REXO1L3P-201ENST00000622202 1288 ntBASIC22.54■■□□□ 1.2
SMARCC1Q92922 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC1Q92922 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMARCC1Q92922 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 COX20P2-201ENST00000452636 358 ntBASIC22.53■■□□□ 1.2
SMARCC1Q92922 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 AC025678.2-201ENST00000562061 970 ntBASIC22.53■■□□□ 1.2
SMARCC1Q92922 AC068137.2-201ENST00000605408 478 ntBASIC22.53■■□□□ 1.2
SMARCC1Q92922 AC093512.1-201ENST00000617969 520 ntBASIC22.53■■□□□ 1.2
SMARCC1Q92922 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC1Q92922 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC1Q92922 AL121761.2-201ENST00000598007 1648 ntBASIC22.53■■□□□ 1.2
SMARCC1Q92922 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms