Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.28■□□□□ 0.2
SGCDQ92629 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SGCDQ92629 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.28■□□□□ 0.2
SGCDQ92629 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.27■□□□□ 0.2
SGCDQ92629 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.27■□□□□ 0.2
SGCDQ92629 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.27■□□□□ 0.2
SGCDQ92629 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.27■□□□□ 0.2
SGCDQ92629 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 GUSBP6-202ENST00000438529 1198 ntBASIC16.27■□□□□ 0.2
SGCDQ92629 AC097658.1-201ENST00000475555 843 ntBASIC16.27■□□□□ 0.2
SGCDQ92629 PRKY-204ENST00000533551 1019 ntBASIC16.27■□□□□ 0.2
SGCDQ92629 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.27■□□□□ 0.2
SGCDQ92629 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.27■□□□□ 0.2
SGCDQ92629 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGCDQ92629 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SGCDQ92629 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.27■□□□□ 0.2
SGCDQ92629 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGCDQ92629 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.27■□□□□ 0.19
SGCDQ92629 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
SGCDQ92629 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGCDQ92629 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SGCDQ92629 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.27■□□□□ 0.19
SGCDQ92629 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGCDQ92629 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SGCDQ92629 GPAT2P1-201ENST00000444924 1672 ntBASIC16.27■□□□□ 0.19
SGCDQ92629 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGCDQ92629 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.27■□□□□ 0.19
SGCDQ92629 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SGCDQ92629 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SGCDQ92629 HLA-J-201ENST00000462773 1622 ntBASIC16.27■□□□□ 0.19
SGCDQ92629 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SGCDQ92629 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 AC103702.1-201ENST00000548801 2630 ntBASIC16.26■□□□□ 0.19
SGCDQ92629 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.26■□□□□ 0.19
SGCDQ92629 MIR149-201ENST00000384879 89 ntBASIC16.26■□□□□ 0.19
SGCDQ92629 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.26■□□□□ 0.19
SGCDQ92629 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.26■□□□□ 0.19
SGCDQ92629 AC008040.2-201ENST00000461049 708 ntBASIC16.26■□□□□ 0.19
SGCDQ92629 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 AC098934.4-201ENST00000564127 592 ntBASIC16.26■□□□□ 0.19
SGCDQ92629 CKBP1-201ENST00000565489 1086 ntBASIC16.26■□□□□ 0.19
SGCDQ92629 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGCDQ92629 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SGCDQ92629 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SGCDQ92629 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 REXO1L11P-201ENST00000620964 1927 ntBASIC16.25■□□□□ 0.19
SGCDQ92629 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.25■□□□□ 0.19
SGCDQ92629 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SGCDQ92629 AC132938.6-201ENST00000623828 1655 ntBASIC16.25■□□□□ 0.19
SGCDQ92629 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SGCDQ92629 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGCDQ92629 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.25■□□□□ 0.19
SGCDQ92629 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SGCDQ92629 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SGCDQ92629 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms