Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35BQ8NCS4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 HLA-J-201ENST00000462773 1622 ntBASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM35BQ8NCS4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 AL845331.1-201ENST00000424978 1190 ntBASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 AP000550.4-202ENST00000639755 178 ntBASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35BQ8NCS4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 MIR1224-201ENST00000408193 85 ntBASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 AC246785.2-201ENST00000432512 513 ntBASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 TSSC2-201ENST00000450217 709 ntBASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 AL445228.2-201ENST00000605589 952 ntBASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 AC010331.1-201ENST00000611423 582 ntBASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM35BQ8NCS4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms