Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 SCARNA2-201ENST00000458748 420 ntBASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 AF186996.4-201ENST00000467186 377 ntBASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 AC064862.7-201ENST00000604520 867 ntBASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 PKD1P1-201ENST00000458669 6805 ntBASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.71■□□□□ 0.59
SCN4BQ8IWT1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.71■□□□□ 0.58
SCN4BQ8IWT1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.71■□□□□ 0.58
SCN4BQ8IWT1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 AC009949.1-201ENST00000623048 1830 ntBASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 KRT18P67-201ENST00000432816 1264 ntBASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 AC073648.2-201ENST00000510116 352 ntBASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 AC148477.8-201ENST00000624298 468 ntBASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 HLA-A-201ENST00000376802 1334 ntBASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN4BQ8IWT1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 COX5BP2-201ENST00000392354 334 ntBASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 AC122714.2-201ENST00000502787 707 ntBASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 RNPS1P1-201ENST00000507437 918 ntBASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 AL773604.1-201ENST00000617417 272 ntBASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms