Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AC092068.3-201ENST00000587894 2016 ntBASIC16.76■□□□□ 0.27
LPCAT4Q643R3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AC091874.3-201ENST00000512672 1195 ntBASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AC008687.6-201ENST00000596318 630 ntBASIC16.76■□□□□ 0.27
LPCAT4Q643R3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 REXO1L11P-201ENST00000620964 1927 ntBASIC16.76■□□□□ 0.27
LPCAT4Q643R3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPCAT4Q643R3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 AC116353.5-201ENST00000638148 1699 ntBASIC16.75■□□□□ 0.27
LPCAT4Q643R3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 MIR663A-201ENST00000385250 93 ntBASIC16.75■□□□□ 0.27
LPCAT4Q643R3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 MIPEPP3-201ENST00000412105 444 ntBASIC16.75■□□□□ 0.27
LPCAT4Q643R3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 AC008622.2-201ENST00000617006 1229 ntBASIC16.75■□□□□ 0.27
LPCAT4Q643R3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LPCAT4Q643R3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 DUTP2-201ENST00000519164 463 ntBASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AC023824.1-201ENST00000562945 2975 ntBASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms