Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 AC018445.3-201ENST00000624177 1945 ntBASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCP2Q5VXM1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 KRT19P2-202ENST00000557173 1012 ntBASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 STK25P1-201ENST00000585406 838 ntBASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 AC027612.4-201ENST00000605371 583 ntBASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCP2Q5VXM1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 AL031598.1-201ENST00000561511 1773 ntBASIC16.77■□□□□ 0.27
CDCP2Q5VXM1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 AC126763.1-201ENST00000552015 2118 ntBASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 AP002414.1-201ENST00000391405 1147 ntBASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 PTCHD3P3-201ENST00000403073 906 ntBASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 OR7E47P-204ENST00000575924 449 ntBASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 GGTLC5P-201ENST00000617623 998 ntBASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCP2Q5VXM1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.75■□□□□ 0.27
CDCP2Q5VXM1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms