Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.27□□□□□ -0.13
PAX9P55771 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PAX9P55771 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PAX9P55771 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.26□□□□□ -0.13
PAX9P55771 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.26□□□□□ -0.13
PAX9P55771 DDX43P3-201ENST00000441064 443 ntBASIC14.26□□□□□ -0.13
PAX9P55771 AP003041.3-201ENST00000527151 707 ntBASIC14.26□□□□□ -0.13
PAX9P55771 C1QBPP2-201ENST00000528754 825 ntBASIC14.26□□□□□ -0.13
PAX9P55771 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.26□□□□□ -0.13
PAX9P55771 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.26□□□□□ -0.13
PAX9P55771 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.26□□□□□ -0.13
PAX9P55771 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.26□□□□□ -0.13
PAX9P55771 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
PAX9P55771 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 AC010240.3-201ENST00000607688 395 ntBASIC14.26□□□□□ -0.13
PAX9P55771 ITM2C-210ENST00000620962 501 ntBASIC14.26□□□□□ -0.13
PAX9P55771 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PAX9P55771 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.26□□□□□ -0.13
PAX9P55771 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PAX9P55771 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.26□□□□□ -0.13
PAX9P55771 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.25□□□□□ -0.13
PAX9P55771 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 LYSMD4-203ENST00000378904 2122 ntBASIC14.25□□□□□ -0.13
PAX9P55771 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.25□□□□□ -0.13
PAX9P55771 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.25□□□□□ -0.13
PAX9P55771 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.25□□□□□ -0.13
PAX9P55771 AL023803.3-201ENST00000615559 522 ntBASIC14.25□□□□□ -0.13
PAX9P55771 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.25□□□□□ -0.13
PAX9P55771 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PAX9P55771 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.25□□□□□ -0.13
PAX9P55771 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms