Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMGA2P52926 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGA2P52926 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGA2P52926 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HMGA2P52926 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGA2P52926 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGA2P52926 MIR718-201ENST00000390190 70 ntBASIC16.2■□□□□ 0.18
HMGA2P52926 AP000523.1-201ENST00000398242 1049 ntBASIC16.2■□□□□ 0.18
HMGA2P52926 HMGA1P5-201ENST00000412453 271 ntBASIC16.2■□□□□ 0.18
HMGA2P52926 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGA2P52926 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HMGA2P52926 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGA2P52926 FAM87A-204ENST00000613235 858 ntBASIC16.2■□□□□ 0.18
HMGA2P52926 AC010947.1-201ENST00000623454 693 ntBASIC16.2■□□□□ 0.18
HMGA2P52926 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGA2P52926 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGA2P52926 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGA2P52926 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGA2P52926 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGA2P52926 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HMGA2P52926 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGA2P52926 AC112698.1-201ENST00000510299 916 ntBASIC16.19■□□□□ 0.18
HMGA2P52926 AC008550.1-201ENST00000511500 884 ntBASIC16.19■□□□□ 0.18
HMGA2P52926 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGA2P52926 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGA2P52926 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGA2P52926 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HMGA2P52926 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGA2P52926 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGA2P52926 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
HMGA2P52926 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGA2P52926 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HMGA2P52926 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.19■□□□□ 0.18
HMGA2P52926 KRT17P2-201ENST00000300992 1314 ntBASIC16.19■□□□□ 0.18
HMGA2P52926 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HMGA2P52926 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HMGA2P52926 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMGA2P52926 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HMGA2P52926 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGA2P52926 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGA2P52926 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGA2P52926 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HMGA2P52926 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGA2P52926 AL355075.4-201ENST00000554988 638 ntBASIC16.18■□□□□ 0.18
HMGA2P52926 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMGA2P52926 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGA2P52926 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.18■□□□□ 0.18
HMGA2P52926 AL139327.4-201ENST00000612362 153 ntBASIC16.18■□□□□ 0.18
HMGA2P52926 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HMGA2P52926 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
HMGA2P52926 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HMGA2P52926 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGA2P52926 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGA2P52926 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms